Introduction to interactive data visualization in R environment
Agnieszka Wnuk
agnieszka_wnuk@sggw.edu.plKatedra Doświadczalnictwa i Bioinformatyki, Szkoła Główna Gospodarstwa Wiejskiego, Warszawa (Poland)
Marcin Kozak
Katedra Doświadczalnictwa i Bioinformatyki, Szkoła Główna Gospodarstwa Wiejskiego, Warszawa (Poland)
Małgorzata Tartanus
Instytut Ogrodnictwa, ul. Konstytucji 3 Maja 1/3, 96-100 Skierniewice (Poland)
Abstract
Data visualization is a very useful tool supporting analyses of agricultural data at each stage, including data exploration, interpretation, and drawing conclusions. It frequently helps one to observe patterns in data, find outliers or untypical values, which otherwise would be difficult to detect. However, the usefulness of visualization can be greatly improved by the dynamic user’s influence on the graph by interactive visualization. This paper introduces basic possibilities of applying such type of visualization to improve interpretational possibilities in data analysis. In this way we want to direct the readers’ attention to rich opportunities that interactive visualization offers. The R environment is used in the paper; each example includes also the R code, which can be used by the reader to run the example, but can also be used in practical data analysis.
Keywords:
data analysis, graphical methods, visualizationReferences
Anderson E. 1935. The irises of the Gaspe Peninsula, Bulletin of the American Iris Society, 59: 2 — 5.
Google Scholar
Biecek P. 2008. Przewodnik po pakiecie R. Oficyna Wydawnicza GIS.
Google Scholar
Cleveland W. S. 1993. Visualizing data. Hobart Press, Summit, NJ, USA.
Google Scholar
Cleveland W. S. 1994. The elements of graphing data. 2ed. Hobart Press, Summit, N J, USA.
Google Scholar
Fisher R. A. 1936. The use of multiple measurements in taxonomic problems. Annals of Eugenics, 7, Part II,: 179 — 188.
Google Scholar
Friedman J. H., Stuetzle W. 2002. John W. Tukey's work on interactive graphics. The Annals of Statistics 30 (6): 1629 — 1639.
Google Scholar
Kozak, M. 2010. Basic principles of graphing data. Scientia Agricola 67: 483 — 494.
Google Scholar
Kozak, M., Bocianowski, J., Sawkojć, S., Wnuk, A. 2010. Call for more graphical elements in statistical teaching and consultancy. Biometrical Letters 47 (1): 57 — 68.
Google Scholar
Mendiburu F. de. 2010. agricolae: Statistical procedures for agricultural research. R package version 1.0-9. http://CRAN.R-project.org/package=agricolae.
Google Scholar
Snow G. 2010. TeachingDemos: Demonstrations for teaching and learning. R package version 2.7. http://CRAN.R-project.org/package=TeachingDemos.
Google Scholar
Tierney L. 2010. tkrplot: TK Rplot. R package version 0.0-19. http://CRAN.R-project.org/package=tkrplot
Google Scholar
Urbanek S., Wichtrey T. 2010. iplots: iPlots – interactive graphics for R. R package version 1.1-3. http://www.rosuda.org/iplots/.
Google Scholar
Authors
Agnieszka Wnukagnieszka_wnuk@sggw.edu.pl
Katedra Doświadczalnictwa i Bioinformatyki, Szkoła Główna Gospodarstwa Wiejskiego, Warszawa Poland
Authors
Marcin KozakKatedra Doświadczalnictwa i Bioinformatyki, Szkoła Główna Gospodarstwa Wiejskiego, Warszawa Poland
Authors
Małgorzata TartanusInstytut Ogrodnictwa, ul. Konstytucji 3 Maja 1/3, 96-100 Skierniewice Poland
Statistics
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