FATTY ACID AND TRANSCRIPT PROFILING IN DEVELOPING SEEDS OF THREE BRASSICA NAPUS CULTIVARS

Mariana Petkova


Agriculture University-Plovdiv, 400012 Mendeleev Blvd., Bulgaria (Bulgaria)

Wun S. Chao


USDA-Agricultural Research Service, 1605 Albrecht Blvd., Fargo, ND 58102 USA (United States)

Leonard Cook


USDA-Agricultural Research Service, 1605 Albrecht Blvd., Fargo, ND 58102 USA (United States)

Mark West


USDA-Agricultural Research Service, 2150 Centre Ave., Bldg. D, Suite 300, Fort Collins, CO 80526 USA (United States)

Mukhlesur Rahman


North Dakota State University, Department of Plant Sciences, P.O. Box 6050, Fargo, ND 58108 USA (United States)

Michael E. Foley

michael.foley@ars.usda.gov
USDA-Agricultural Research Service, 1605 Albrecht Blvd., Fargo, ND 58102 USA (United States)


Abstract

Fatty acid levels and gene expression profiles for selected genes associated with the synthesis of fatty acids (FA), triacylglycerol, and oil body proteins were examined in three oilseed rape (Brassica napus) cultivars that have utility for cultivar development in our spring canola breeding program. The seed oil content of Bronowski, Q2, and Westar was 39.0, 40.1, and 40.6%, respectively at 40 days after flowering (DAF). During the 20 to 40 day period of seed development, cultivars had varying levels of palmitic, stearic, oleic, linoleic, α-linolenic, eicosenoic, and erucic acid. In general, the percentage of each FA was similar among the cultivars during seed development. However, the level of oleic acid was lower and the levels of eicosenoic acid and erucic acid were higher in Bronowski than in Q2 and Westar seeds; linoleic acid also tended to be lower in Bronowski. Gene expression among the cultivars was similar from 10 to 40 DAF. The few exceptions were that expression of KAS1 and SAD were higher in Westar and Q2 than in Bronowski at 25 DAF, SAD was highest in Q2, intermediate in Westar, and lowest in Bronowski at 35 DAF, FAD2 was higher in Q2 than in Bronowski at 35 DAF, FAD3 was higher in Q2 than in Bronowski at 15 DAF and Q2 and Westar at 25 and 30 DAF, and FAE1 was higher in Westar and Q2 than in Bronowski at 30 DAF. Correlation analysis for gene expression against DAF for each genotype supported a common trend in gene expression among the three cultivars with gene expression tending to decrease over time; except for LPAAT, which tended to increase. The correlation between the level of FAs and expression of genes by genotype indicated no general trend; rather correlations seem to depend on the genotype.


Keywords:

canola, Brassica napus, fatty acid, gene expression, oilseed, rapeseed, seed

Bates PD, Stymne S, Ohlrogge J (2013) Biochemical pathways in seed oil synthesis. Curr. Opin. Plant Biol. 16, 358-364.
Google Scholar

Baud S, Lepiniec L (2009) Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis. Plant Physiol. Biochem. 47, 448-455.
Google Scholar

Baud S, Lepiniec L (2010) Physiological and developmental regulation of seed oil production. Prog. Lipid Res. 49, 235-249.
Google Scholar

Canvin DT (1965) The effect of temperature on the oil content and fatty acid composition of the oils from several oil seed crops. Can. J. Bot. 43, 63-69.
Google Scholar

Chang S, Puryear J, Cairney J (1993) A simple and efficient method for isolating RNA from pine trees. Plant Mol. Biol. Rep. 11, 113-116.
Google Scholar

Chao WS (2008) Real-time PCR as a tool to study weed biology. Weed Sci. 56, 20-296.
Google Scholar

Eisen MB, Spellman PT, Brown PO, Botstein D (1998) Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. USA 95, 14863-14868.
Google Scholar

Elborough KM, Winz R, Deka RK, Markham JE, White AJ, Rawsthorne S, Slabas AR (1996) Biotin carboxyl carrier protein and carboxyltransferase subunit form of acetyl-CoA carboxylase from Brassica napus: cloning and analysis of expression during oilseed rape embryogenesis. Biochem. J. 315, 103-112.
Google Scholar

Finlayson AJ, Krzymanski J, Downey RK (1973) Comparison of chemical and agronomic characteristics of two Brassica napus L. cultivars, Bronowski and Target. J. Am. Chem. Soc. 50, 407-410.
Google Scholar

Haagenson DM, Brudvik RL, Lin H, Wiesenborn DP (2010) Implementing an in situ alkaline transesterification method for canola biodiesel quality screening. J. Am. Oil Chem. Soc. 87, 1351-1358.
Google Scholar

Hu Y, Wu G, Cao Y, Wu Y, Xiao L, Li X, Lu C (2009) Breeding response of transcript profiling in developing seeds of Brassica napus. BMC Mol. Biol. 10, 49.
Google Scholar

Johnson RA, Wichern DW (2007) Applied Multivariate Statistical Analysis, Pearson Prentice-Hall, Upper Saddle River, NJ.
Google Scholar

Juska A, Busch L, Wu FH (1997) Producing genetic diversity in crop plants: the case of Canadian rapeseed, 1954–1991. J. Sustain. Agric. 9, 5-23.
Google Scholar

Katavic V, Agrawal GK, Hajduch M, Harris SL, Thelen JJ (2006) Protein and lipid composition analysis of oil bodies from two Brassica napus cultivars. Proteomics 6, 4586-4598.
Google Scholar

Katavic V, Mietkiewska E, Barton DL, Giblin EM, Reed DW, Taylor DC (2002) Restoring enzyme activity in nonfunctional low erucic acid Brassica napus fatty acid elongase 1 by a single amino acid substitution. Eur. J. Biochem. 269, 5625-5631.
Google Scholar

Klassen AJ, Downey RK, Capcara JJ (1987) Westar summer rape, Can. J. Plant Sci. 67, 491-493.
Google Scholar

Li-Beisson Y, Shorrosh B, Beisson F, Andersson MX, Arondel V, Bates PD, Baud S, Bird D, DeBono A, Durrett TP, Franke RB, Graham IA, Katayama K, Kelly AA, Larson T, Markham JE, Miquel M, Molina I, Nishida I, Rowland O, Samuels L, Schmid KM, Wada H, Welti R, Xu C, Zallot R, Ohlrogge J (2013) Acyl-lipid metabolism. In The Arabidopsis Book, The Am. Soc. Plant Biol., Rockville, MD, p. e0133.
Google Scholar

Niu Y, Wu GZ, Ye R, Lin WH, Shi QM, Xue LJ, Xu XD, Li Y, Du YG, Xue HW (2009) Global analysis of gene expression profiles in Brassica napus developing seeds reveals a conserved lipid metabolism regulation with Arabidopsis thaliana. Mol. Plant 2, 1107-1122.
Google Scholar

Puyaubert J, Garcia C, Chevalier S, Lessire R (2005) Acyl-CoA elongase, a key enzyme in the development of high-erucic acid rapeseed? Eur. J. Lipid Sci. Technol. 107, 263-267.
Google Scholar

R Core Team, http://www.r-project.org/, last accessed 15 November 2015.
Google Scholar

Stefansson BR, Hougen FW, Downey RK (1961) Note on the isolation of rape plants with seed oil free from erucic acid. Can. J. Plant Sci. 41, 218-219.
Google Scholar

Stefansson BR, Kondra ZP (1970) Inheritance of the major glucosinolates of rapeseed (Brassica napus) meal. Can. J. Plant Sci. 50, 643-648.
Google Scholar

Stefansson BR, Kondra ZP (1975) Tower summer rape. Can. J. Plant Sci. 55, 343-344.
Google Scholar

Stringam GR, Degenhardt DF, Thiagarajah MR, Bansal VK (1999) Q2 summer rape. Can. J. Plant Sci. 79, 597-598.
Google Scholar

Troncoso-Ponce MA, Kilaru A, Cao X, Durrett TP, Fan J, Jensen JK, Thrower NA, Pauly M, Wilkerson C, Ohlrogge JB (2011) Comparative deep transcriptional profiling of four developing oilseeds. Plant J. 68, 1014-1027.
Google Scholar

Venglat P, Xiang D, Yang H, Wan L, Tibiche C, Ross A, Wang E, Selvaraj G, Datla R (2013) Gene expression profiles during embryo development in Brassica napus. Plant Breed. 132, 514-522.
Google Scholar

Vuorinen AL, Kalpio M, Linderborg KM, Kortesniemi M, Lehto K, Niemi J, Yang B, Kallio HP (2014) Coordinate changes in gene expression and triacylglycerol composition in the developing seeds of oilseed rape (Brassica napus) and turnip rape (Brassica rapa). Food Chem. 145, 664-673.
Google Scholar

Wu G, Wu Y, Xiao L, Li X, Lu C (2008) Zero erucic acid trait of rapeseed (Brassica napus L.) results from a deletion of four base pairs in the fatty acid elongase 1 gene. Theor. Appl. Genet. 116, 491-499.
Google Scholar

Download


Published
2020-06-29

Cited by

Petkova, M., Chao, W. S., Cook, L., West, M., Rahman, M., & Foley, M. E. (2020). FATTY ACID AND TRANSCRIPT PROFILING IN DEVELOPING SEEDS OF THREE BRASSICA NAPUS CULTIVARS. Plant Breeding and Seed Science, 72, 3–32. Retrieved from http://ojs.ihar.edu.pl/index.php/pbss/article/view/247

Authors

Mariana Petkova 

Agriculture University-Plovdiv, 400012 Mendeleev Blvd., Bulgaria Bulgaria

Authors

Wun S. Chao 

USDA-Agricultural Research Service, 1605 Albrecht Blvd., Fargo, ND 58102 USA United States

Authors

Leonard Cook 

USDA-Agricultural Research Service, 1605 Albrecht Blvd., Fargo, ND 58102 USA United States

Authors

Mark West 

USDA-Agricultural Research Service, 2150 Centre Ave., Bldg. D, Suite 300, Fort Collins, CO 80526 USA United States

Authors

Mukhlesur Rahman 

North Dakota State University, Department of Plant Sciences, P.O. Box 6050, Fargo, ND 58108 USA United States

Authors

Michael E. Foley 
michael.foley@ars.usda.gov
USDA-Agricultural Research Service, 1605 Albrecht Blvd., Fargo, ND 58102 USA United States

Statistics

Abstract views: 154
PDF downloads: 36


License

Copyright (c) 2020 Mariana Petkova, Wun S. Chao, Leonard Cook, Mark West, Mukhlesur Rahman, Michael E. Foley

Creative Commons License

This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.

All articles published in electronic form under CC BY-SA 4.0, in open access, the full content of the licence is available at: https://creativecommons.org/licenses/by-sa/4.0/legalcode.pl .