miRNAs involved in the seed ageing and germination process
Marta Puchta
m.puchta@ihar.edu.plInstytut Hodowli i Aklimatyzacji Roślin – Państwowy Instytut Badawczy w Radzikowie (Poland)
https://orcid.org/0000-0002-0126-5858
Abstract
The ageing of seeds is a process that leads to irreversible changes that cause the loss of seed value over time. Many interrelated molecular, biochemical, physiological and metabolic processes are involved in it. The degradation of the natural environment requires intensive plant species protection. Preserving germination capacity plays a key role in protecting the biodiversity damaged by genetic erosion. The studies conducted so far show that miRNAs are involved in the dynamic germination process of seeds. However, little is known about the state of specific miRNA regulations and their targets. These, are potentially important factors contributing to the ageing of seeds during long-term storage.
This review includes literature review of research concerning the role of miRNA in the regulation of processes leading to seed ageing and germination.
Keywords:
miRNA, seed aging, vitality, germinationReferences
Achard, P., Renou, J. P., Berthomé, R., Harberd, N. P., Genschik, P., (2008). Plant DELLAs Restrain Growth and Promote Survival of Adversity by Reducing the Levels of Reactive Oxygen Species. Curr. Biol. 18, 656–660. https://doi.org/10.1016/j.cub.2008.04.034
Google Scholar
Boczkowska, M., Rucińska, A., Targońska-Karasek, M., Olszak, M., Niedzielski, M., Rakoczy-Trojanowska, M., (2019). Starzenie się nasion – złożony problem banków genów. Praca przeglądowa. Agron.Sci. 73, 15–26. https://doi.org/10.24326/asx.2018.4.2
Google Scholar
Bray, C. M., Ashraf, M., Davison, P. A., (1993). Molecular markers of seed quality. In: Come D, Combineau F, eds, Proceedings of the Fourth International Workshops on Seeds. ASFIS, Paris 887–896.
Google Scholar
Brennecke, J., Stark, A., Russell, R. B., Cohen, S.M., (2005). Principles of MicroRNA–Target Recognition. PLoS Biol. 3, e85. https://doi.org/10.1371/journal.pbio.0030085
Google Scholar
Chen, X., (2004). A MicroRNA as a Translational Repressor of APETALA2 in Arabidopsis Flower Development. Science 303, 2022–2025. https://doi.org/10.1126/science.1088060
Google Scholar
Currey, D. R., (1965). An Ancient Bristlecone Pine Stand in Eastern Nevada. Ecology 46, 564–566. https://doi.org/10.2307/1934900
Google Scholar
Ellis, R. H., Hong, T. D., Roberts, E. H., (1990). An Intermediate Category of Seed Storage Behaviour?: I. COFFEE. J Exp Bot 41, 1167–1174. https://doi.org/10.1093/jxb/41.9.1167
Google Scholar
Gutiérrez, G., Cruz, F., Moreno, J., González-Hernández, V. A., Vázquez-Ramos, J. M., (1993). Natural and artificial seed ageing in maize: germination and DNA synthesis. Seed Sci. Res. 3, 279–285. https://doi.org/10.1017/S0960258500001896
Google Scholar
Harrington, J., (1963). Practical instructions and device on seed storage. Proceedings of the International Seed Testing Association. 28, 989–994.
Google Scholar
Hu, J., Jin, J., Qian, Q., Huang, K., Ding, Y., (2016). Small RNA and degradome profiling reveals miRNA regulation in the seed germination of ancient eudicot Nelumbo nucifera. BMC Genomics 17, 684. https://doi.org/10.1186/s12864‒016‒3032‒4
Google Scholar
Jung, H. J., Kang, H., (2007). Expression and functional analyses of microRNA417 in Arabidopsis thaliana under stress conditions. Plant Physiol. Biochem. 45, 805–811. https://doi.org/10.1016/j.plaphy.2007.07.015
Google Scholar
Kim, J. Y., Kwak, K. J., Jung, H. J., Lee, H. J., Kang, H., (2010). MicroRNA402 Affects Seed Germination of Arabidopsis thaliana Under Stress Conditions via Targeting DEMETER-LIKE Protein3 mRNA. Plant Cell Physiol. 51, 1079–1083. https://doi.org/10.1093/pcp/pcq072
Google Scholar
Liu, P. P., Montgomery, T. A., Fahlgren, N., Kasschau, K. D., Nonogaki, H., Carrington, J.C., (2007). Repression of AUXIN RESPONSE FACTOR10 by microRNA160 is critical for seed germination and post-germination stages: microRNA in Arabidopsis seed germination. Plant J. 52, 133–146. https://doi.org/10.1111/j.1365‒313X.2007.03218.x
Google Scholar
Mallory, A. C., Bartel, D. P., Bartel, B., (2005). MicroRNA-Directed Regulation of Arabidopsis AUXIN RESPONSE FACTOR17 Is Essential for Proper Development and Modulates Expression of Early Auxin Response Genes. Plant Cell 17, 1360–1375. https://doi.org/10.1105/tpc.105.031716
Google Scholar
Millar, A. A., (2005). The Arabidopsis GAMYB-Like Genes, MYB33 and MYB65, Are MicroRNA-Regulated Genes That Redundantly Facilitate Anther Development. Plant Cell 17, 705–721. https://doi.org/10.1105/tpc.104.027920
Google Scholar
miRBAse ver.22.1, n.d.
Google Scholar
Mu, J., Tan, H., Hong, S., Liang, Y., Zuo, J., (2013). Arabidopsis Transcription Factor Genes NF-YA1, 5, 6, and 9 Play Redundant Roles in Male Gametogenesis, Embryogenesis, and Seed Development. Mol. Plant. 6, 188–201. https://doi.org/10.1093/mp/sss061
Google Scholar
Neto, N. B. M., Ceci Castilho Custódio, Massanori Takaki, (2016). Evaluation of naturally and artificially aged seeds of Phaseolus vulgaris L. https://doi.org/10.13140/RG.2.1.3093.9283
Google Scholar
Priestley, D. A., (1986). Seed aging: implications for seed storage and persistence in the soil. Comstock Associates, Ithaca, N.Y.
Google Scholar
Reinhart, B. J., (2002). MicroRNAs in plants. Genes Dev. 16, 1616–1626. https://doi.org/10.1101/gad.1004402
Google Scholar
Reyes, J. L., Chua, N. H., (2007). ABA induction of miR159 controls transcript levels of two MYB factors during Arabidopsis seed germination: miR159 regulation of ABA responses during germination. Plant J. 49, 592–606. https://doi.org/10.1111/j.1365-313X.2006.02980.x
Google Scholar
Roberts, E. H., (1979). Seed deterioration and loss of viability. Advances in Research and Technology of Seeds 4, 25–42.
Google Scholar
Rogers, K., Chen, X., (2013). Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs. The Plant Cell 25, 2383–2399. https://doi.org/10.1105/tpc.113.113159
Google Scholar
Sarkar Das, S., Yadav, S., Singh, A., Gautam, V., Sarkar, A. K., Nandi, A. K., Karmakar, P., Majee, M., Sanan-Mishra, N., (2018). Expression dynamics of miRNAs and their targets in seed germination conditions reveals miRNA-ta-siRNA crosstalk as regulator of seed germination. Sci. Rep. 8, 1233. https://doi.org/10.1038/s41598-017-18823-8
Google Scholar
Shen-Miller, J., (2002). Sacred lotus, the long-living fruits of China Antique. Seed Sci. Res. 12, 131–143. https://doi.org/10.1079/SSR2002112
Google Scholar
Steiner, A. M., Ruckenbauer, P., (1995). Germination of 110-year-old cereal and weed seeds, the Vienna Sample of 1877. Verification of effective ultra-dry storage at ambient temperature. Seed Sci. Res. 5, 195–199. https://doi.org/10.1017/S0960258500002853
Google Scholar
Sun, Q., Wang, J., Sun, B., (2007). Advances on Seed Vigor Physiological and Genetic Mechanisms. Agricultural Sciences in China 6, 1060–1066. https://doi.org/10.1016/S1671-2927(07)60147-3
Google Scholar
Ventura, L., Donà, M., Macovei, A., Carbonera, D., Buttafava, A., Mondoni, A., Rossi, G., Balestrazzi, A., (2012). Understanding the molecular pathways associated with seed vigor. Plant Physiol. Biochem. 60, 196–206. https://doi.org/10.1016/j.plaphy.2012.07.031
Google Scholar
Wang, J., Mei, J., Ren, G., (2019). Plant microRNAs: Biogenesis, Homeostasis, and Degradation. Front. Plant Sci. 10, 360. https://doi.org/10.3389/fpls.2019.00360
Google Scholar
Wang, L., Liu, H., Li, D., Chen, H., (2011). Identification and characterization of maize microRNAs involved in the very early stage of seed germination. BMC Genomics 12, 154. https://doi.org/10.1186/1471-2164-12-154
Google Scholar
Authors
Marta Puchtam.puchta@ihar.edu.pl
Instytut Hodowli i Aklimatyzacji Roślin – Państwowy Instytut Badawczy w Radzikowie Poland
https://orcid.org/0000-0002-0126-5858
Statistics
Abstract views: 390PDF downloads: 279
License
This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.
Upon submitting the article, the Authors grant the Publisher a non-exclusive and free license to use the article for an indefinite period of time throughout the world in the following fields of use:
- Production and reproduction of copies of the article using a specific technique, including printing and digital technology.
- Placing on the market, lending or renting the original or copies of the article.
- Public performance, exhibition, display, reproduction, broadcasting and re-broadcasting, as well as making the article publicly available in such a way that everyone can access it at a place and time of their choice.
- Including the article in a collective work.
- Uploading an article in electronic form to electronic platforms or otherwise introducing an article in electronic form to the Internet or other network.
- Dissemination of the article in electronic form on the Internet or other network, in collective work as well as independently.
- Making the article available in an electronic version in such a way that everyone can access it at a place and time of their choice, in particular via the Internet.
Authors by sending a request for publication:
- They consent to the publication of the article in the journal,
- They agree to give the publication a DOI (Digital Object Identifier),
- They undertake to comply with the publishing house's code of ethics in accordance with the guidelines of the Committee on Publication Ethics (COPE), (http://ihar.edu.pl/biblioteka_i_wydawnictwa.php),
- They consent to the articles being made available in electronic form under the CC BY-SA 4.0 license, in open access,
- They agree to send article metadata to commercial and non-commercial journal indexing databases.
Most read articles by the same author(s)
- Marta Puchta, Paulina Bolc, Jerzy H. Czembor, Urszula Piechota, Optimization of the ddRadSeq method for Hordeum sp. and Zea sp. , Bulletin of Plant Breeding and Acclimatization Institute: No. 283 (2018): Special issue
- Elżbieta Czembor, Marta Puchta, Urszula Piechota, Jerzy H. Czembor, Genetic diversity in the collection of modern and historical inbred lines of maize for resistance to ear rot caused by Fusarium verticillioides and the ability to accumulate fumonisins , Bulletin of Plant Breeding and Acclimatization Institute: No. 283 (2018): Special issue
