Identification of the genome regions correlated with cold hardiness of apple rootstocks by transcriptomic analysis of differentially expressed candidate genes
Sylwia Keller-Przybyłkowicz
sylwia.keller@inhort.plInstytut Ogrodnictwa w Skierniewicach (Poland)
Mariusz Lewandowski
Instytut Ogrodnictwa w Skierniewicach (Poland)
Małgorzata Korbin
Instytut Ogrodnictwa w Skierniewicach (Poland)
Supporting Agencies
Prace zostały wykonane w ramach badań podstawowych na rzecz postępu biologicznego w produkcji roślinnej na podstawie decyzji Ministra Rolnictwa i Rozwoju Wsi nr HOR.hn.802.20.2018, Zadanie 73.
Keywords:
adnotacja, EST, jabłoń, qPCR, RNAseq, sekwencjonowanie NGS, transkryptomReferences
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Żurawicz E., Lewandowski M. 2014. Controlled Freezing as a Low-Temperature Tolerance Test for Apple Rootstocks. Acta Horticulture 1058: 451 — 456. Google Scholar
Imelfort M., Edwards D. 2009. De novo sequencing of plant genomes using second-generation technologies. Briefings in Bioinformatics, Vol. 10, Issue 6: 609 — 618
Velasco R., Zharkikh A., Affourtit J., Dhingra A., Cestaro A., Kalyanaraman A., Fontana P., Bhatnagar S.K., Troggio M., Pruss D., Salvi S., Pindo M., Baldi P., Castelletti S., Cavaiuolo M., Coppola G., Costa F., Cova V., Dal Ri A., Goremykin V., Komjanc M., Longhi S., Magnago P., Malacarne G., Malnoy M., Micheletti D., Moretto M., Perazzolli M., Si-Ammour A., Vezzulli S., Zini E., Eldredge G., Fitzgerald L.M., Gutin N., Lanchbury J., Macalma T., Mitchell J.T., Reid J., Wardell B., Kodira C., Chen Z., Desany B., Niazi F., Palmer M., Koepke T., Jiwan D., Schaeffer S., Krishnan V., Wu C., Chu V.T., King S. T., Vick J., Tao Q., Mraz A., Stormo A., Stormo K., Bogden R., Ederle D., Stella A., Vecchietti A., Kater M. M., Masiero S., Lasserre P., Lespinasse Y., Allan A. C., Bus V., Chagné D., Crowhurst R. N., Gleave A. P., Lavezzo E., Fawcett J.A., Proost S., Rouzé P., Sterck L., Toppo S., Lazzari B., Hellens R. P., Durel C. E., Gutin A., Bumgarner R. E., Gardiner S.E., Skolnick M., Egholm M., Van de Peer Y., Salamini F., Viola R. 2010. The genome of the domesticated apple (Malus × domestica Borkh.). Nature Genetics 42 (10): 833 — 841, DOI:10.1038/ng.654.
Xu. 2010. The Apple genome: A delicious promise. New York Fruit Quarterly, 18 (4).
Żurawicz E., Lewandowski M. 2014. Controlled Freezing as a Low-Temperature Tolerance Test for Apple Rootstocks. Acta Horticulture 1058: 451 — 456. Google Scholar
Keller-Przybyłkowicz, S. ., Lewandowski, M. . and Korbin, M. . (2019) “Identification of the genome regions correlated with cold hardiness of apple rootstocks by transcriptomic analysis of differentially expressed candidate genes”, Bulletin of Plant Breeding and Acclimatization Institute, (286), pp. 415–418. doi: 10.37317/biul-2019-0092.
Authors
Sylwia Keller-Przybyłkowiczsylwia.keller@inhort.pl
Instytut Ogrodnictwa w Skierniewicach Poland
Authors
Mariusz LewandowskiInstytut Ogrodnictwa w Skierniewicach Poland
Authors
Małgorzata KorbinInstytut Ogrodnictwa w Skierniewicach Poland
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