Linkage and association mapping of oat
Edyta Paczos-Grzęda
edyta.paczos@up.lublin.plInstytut Genetyki, Hodowli i Biotechnologii Roślin, Uniwersytet Przyrodniczy w Lublinie (Poland)
Sylwia Sowa
Instytut Genetyki, Hodowli i Biotechnologii Roślin, Uniwersytet Przyrodniczy w Lublinie (Poland)
Aneta Koroluk
Instytut Genetyki, Hodowli i Biotechnologii Roślin, Uniwersytet Przyrodniczy w Lublinie (Poland)
Joanna Toporowska
Instytut Genetyki, Hodowli i Biotechnologii Roślin, Uniwersytet Przyrodniczy w Lublinie (Poland)
Ewelina Marek
Instytut Genetyki, Hodowli i Biotechnologii Roślin, Uniwersytet Przyrodniczy w Lublinie (Poland)
Piotr Bednarek
Instytut Hodowli i Aklimatyzacji Roślin — Państwowy Instytut Badawczy, Radzików (Poland)
Supporting Agencies
Prace zostały wykonane w ramach badań podstawowych na rzecz postępu biologicznego w produkcji roślinnej na podstawie decyzji Ministra Rolnictwa i Rozwoju Wsi nr HOR.hn.802.9.2018, Zadanie 30.
Keywords:
identyfikacja QTL, mapowanie asocjacyjne, mapowanie sprzężeniowe, mieszańce międzygatunkowe, mieszańce miedzyodmianoweReferences
Brachi B., Faure N., Horton M., Flahauw E., Vazquez A., Nordborg M., Bergelson J., Cuguen J., Roux F. 2010. Linkage and Association Mapping of Arabidopsis thaliana Flowering Time in Nature. PLoS Genet 6 (5): e1000940.
Elshire R. J., Glaubitz J. C., Sun Q., Poland J. A., Kawamoto K., Buckler E. S., Mitchell S. E. 2011 A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species. PLoS One 6 (5): e19379.
Huang Y. F., Poland J. A., Wight C. P., Jackson E. W., Tinker N. A. 2014. Using Genotyping By Sequencing (GBS) for genomic discovery in cultivated oat. PLoS ONE 9 (7): e102448. DOI: 10.1371/journal.pone.0102448.
Kilian B., Graner A. 2012. NGS technologies for analyzing germplasm diversity in genebanks, Briefinds in functional genomics. Vol.11, No 1: 38 — 50.
Rex B. 2013. Genomewide Markers for Controlling Background Variation in Association Mapping. Plant Gen. 10.3835/plantgenome2012.11.0028.
Sansaloni C., Petroli C., Jaccoud D., Carling J., Detering F., Grattapaglia D., Kilian A. 2011. Diversity Array Technology (DArT) and next-generation sequencing combined: genome-wide, high throughput, highly informative genotyping for molecular breeding of Eucalyptus. BMC Proceedings 5 (Suppl. 7): P54. Google Scholar
Elshire R. J., Glaubitz J. C., Sun Q., Poland J. A., Kawamoto K., Buckler E. S., Mitchell S. E. 2011 A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species. PLoS One 6 (5): e19379.
Huang Y. F., Poland J. A., Wight C. P., Jackson E. W., Tinker N. A. 2014. Using Genotyping By Sequencing (GBS) for genomic discovery in cultivated oat. PLoS ONE 9 (7): e102448. DOI: 10.1371/journal.pone.0102448.
Kilian B., Graner A. 2012. NGS technologies for analyzing germplasm diversity in genebanks, Briefinds in functional genomics. Vol.11, No 1: 38 — 50.
Rex B. 2013. Genomewide Markers for Controlling Background Variation in Association Mapping. Plant Gen. 10.3835/plantgenome2012.11.0028.
Sansaloni C., Petroli C., Jaccoud D., Carling J., Detering F., Grattapaglia D., Kilian A. 2011. Diversity Array Technology (DArT) and next-generation sequencing combined: genome-wide, high throughput, highly informative genotyping for molecular breeding of Eucalyptus. BMC Proceedings 5 (Suppl. 7): P54. Google Scholar
Paczos-Grzęda , E. . (2019) “Linkage and association mapping of oat”, Bulletin of Plant Breeding and Acclimatization Institute, (286), pp. 169–172. doi: 10.37317/biul-2019-0037.
Authors
Edyta Paczos-Grzędaedyta.paczos@up.lublin.pl
Instytut Genetyki, Hodowli i Biotechnologii Roślin, Uniwersytet Przyrodniczy w Lublinie Poland
Authors
Sylwia SowaInstytut Genetyki, Hodowli i Biotechnologii Roślin, Uniwersytet Przyrodniczy w Lublinie Poland
Authors
Aneta KorolukInstytut Genetyki, Hodowli i Biotechnologii Roślin, Uniwersytet Przyrodniczy w Lublinie Poland
Authors
Joanna ToporowskaInstytut Genetyki, Hodowli i Biotechnologii Roślin, Uniwersytet Przyrodniczy w Lublinie Poland
Authors
Ewelina MarekInstytut Genetyki, Hodowli i Biotechnologii Roślin, Uniwersytet Przyrodniczy w Lublinie Poland
Authors
Piotr BednarekInstytut Hodowli i Aklimatyzacji Roślin — Państwowy Instytut Badawczy, Radzików Poland
Statistics
Abstract views: 152PDF downloads: 177
License
This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.
Upon submitting the article, the Authors grant the Publisher a non-exclusive and free license to use the article for an indefinite period of time throughout the world in the following fields of use:
- Production and reproduction of copies of the article using a specific technique, including printing and digital technology.
- Placing on the market, lending or renting the original or copies of the article.
- Public performance, exhibition, display, reproduction, broadcasting and re-broadcasting, as well as making the article publicly available in such a way that everyone can access it at a place and time of their choice.
- Including the article in a collective work.
- Uploading an article in electronic form to electronic platforms or otherwise introducing an article in electronic form to the Internet or other network.
- Dissemination of the article in electronic form on the Internet or other network, in collective work as well as independently.
- Making the article available in an electronic version in such a way that everyone can access it at a place and time of their choice, in particular via the Internet.
Authors by sending a request for publication:
- They consent to the publication of the article in the journal,
- They agree to give the publication a DOI (Digital Object Identifier),
- They undertake to comply with the publishing house's code of ethics in accordance with the guidelines of the Committee on Publication Ethics (COPE), (http://ihar.edu.pl/biblioteka_i_wydawnictwa.php),
- They consent to the articles being made available in electronic form under the CC BY-SA 4.0 license, in open access,
- They agree to send article metadata to commercial and non-commercial journal indexing databases.
Most read articles by the same author(s)
- Piotr Bednarek, Agnieszka Niedziela, Marzena Wasiak, Sławomir Bany , Identification of pollen fertility restoration markers in rye (Secale cereale L.) with CMS-Pampa , Bulletin of Plant Breeding and Acclimatization Institute: No. 286 (2019): Special issue
- Edyta Paczos-Grzęda, Sylwia Sowa, Aneta Koroluk, Joanna Toporowska, Ewelina Marek, Crown rust resistance genes pyramiding in oat genome and identification of DNA markers for these genes , Bulletin of Plant Breeding and Acclimatization Institute: No. 286 (2019): Special issue
- Edyta Paczos-Grzęda, Application of the RAPD and SSR methods to genetic similarity assessment of tetraploid species of the Avena L. genus , Bulletin of Plant Breeding and Acclimatization Institute: No. 252 (2009): Regular issue
- Edyta Paczos-Grzęda, Katarzyna Kruk, Sylwia Okoń, Assessment of Avena fatua L. intraspecific genetic similarity based on DNA polymorphism , Bulletin of Plant Breeding and Acclimatization Institute: No. 252 (2009): Regular issue
- Edyta Paczos-Grzęda, Maria Chrząstek, Sylwia Okoń, Agnieszka Grądzielewska, Danuta Miazga, Application of ISSR markers in analysis of intraspecific similarity of Avena sterilis L. , Bulletin of Plant Breeding and Acclimatization Institute: No. 252 (2009): Regular issue
- Sylwia Okoń, Edyta Paczos-Grzęda, Piotr Kraska, Ewa Kwiecińska-Poppe, Edward Pałys, Assessment of genetic similarity of spelt (Triticum aestivum ssp. spelta L.) cultivars based on RAPD markers , Bulletin of Plant Breeding and Acclimatization Institute: No. 252 (2009): Regular issue
- Maria Chrząstek, Katarzyna Kruk, Sylwia Okoń, Edyta Paczos-Grzęda, Emilia Wójtowicz, Estimation of BC1 hybrids (Avena sativa L. × Avena maroccana Gdgr.) × Avena sativa L. regarding cytogenetic stability and some quantitative traits , Bulletin of Plant Breeding and Acclimatization Institute: No. 253 (2009): Regular issue
- Agnieszka Grądzielewska, Edyta Paczos-Grzęda, Daniela Gruszecka, Application of RAPD and ISSR methods to genetic similarity estimation of Greek Dasypyrum villosum (L.) P. Candargy populations , Bulletin of Plant Breeding and Acclimatization Institute: No. 253 (2009): Regular issue
Similar Articles
- Beata Myśków, Anna Łań, Monika Hanek, Analysis of the impact of pollination method on the results of mapping QTL for pre-harvest sprouting in rye , Bulletin of Plant Breeding and Acclimatization Institute: No. 264 (2012): Regular issue
- Paweł Milczarski, Identification of QTLs affecting the flag leaf length in two mapping populations of rye (Secale cereale L.) , Bulletin of Plant Breeding and Acclimatization Institute: No. 250 (2008): Regular issue
- Paweł Milczarski, Identification of QTLs of morphological traits related to lodging of rye (Secale cereale L.) , Bulletin of Plant Breeding and Acclimatization Institute: No. 250 (2008): Regular issue
- Paweł Cz. Czembor, Magdalena Radecka, Edward Arseniuk, Mapping of resistance loci to septoria tritici blotch caused by fungus Mycosphaerella graminicola in wheat , Bulletin of Plant Breeding and Acclimatization Institute: No. 243 (2007): Regular issue
- Sylwia Keller-Przybyłkowicz, Agnieszka Masny, Bogusława Idczak, Krystyna Strączyńska, Abdelrahmen Mostafa Abdelwahab Mohamed, Preparation of the mapping population derived from the cross of ‘Elsanta’and ‘Senga Sengana’ sutble for analysis of QTL regions linked to selected Fragaria traits. , Bulletin of Plant Breeding and Acclimatization Institute: No. 291 (2020): Special issue
- Roman Prażak, Variability and interrelationship of some traits in Aegilops kotschyi Boiss. × Triticum aestivum L. cv. Rusałka hybrids , Bulletin of Plant Breeding and Acclimatization Institute: No. 252 (2009): Regular issue
- Maria Chrząstek, Katarzyna Kruk, Sylwia Okoń, Edyta Paczos-Grzęda, Emilia Wójtowicz, Estimation of BC1 hybrids (Avena sativa L. × Avena maroccana Gdgr.) × Avena sativa L. regarding cytogenetic stability and some quantitative traits , Bulletin of Plant Breeding and Acclimatization Institute: No. 253 (2009): Regular issue
- Marzena Olszewska, Stefan Grzegorczyk, Intensity of photosynthesis and transpiration of leaves of Lotus corniculatus L. grown in mixtures with Festulolium braunii (K. Richt.) A. Camus and Festuca pratensis L. depending on multiple nitrogen fertilization and weather conditions , Bulletin of Plant Breeding and Acclimatization Institute: No. 248 (2008): Regular issue
- Anna Skrzypik, Roman Prażak, Maria Chrząstek, Evaluation of seedling tolerance to aluminum in BC1 hybrids of (Avena sativa L. × Avena fatua L.) × Avena sativa L. , Bulletin of Plant Breeding and Acclimatization Institute: No. 252 (2009): Regular issue
- Paweł Cz. Czembor, Dariusz Mańkowski, Piotr Słowacki, Dominika Piaskowska, Association mapping for resistance genes to leaf rust (Puccinia triticina) and Septoria tritici blotch (Septoria tritici) in wheat , Bulletin of Plant Breeding and Acclimatization Institute: No. 286 (2019): Special issue
You may also start an advanced similarity search for this article.